Publication

Identification of two putative reference genes from grapevine suitable for gene expression analysis in berry and related tissues derived from RNA-Seq data

Mauricio González-Agüero, Miguel García-Rojas, Alex Di Genova, José Correa, Alejandro Maass, Ariel Orellana, Patricio Hinrichsen

December 2013 BMC Genomics
Abstract

Study summary

Data normalization is a key step in gene expression analysis by qPCR. Endogenous control genes are used to estimate variations and experimental errors occurring during sample preparation and expression measurements. However, the transcription level of the most commonly used reference genes can vary considerably in samples obtained from different individuals, tissues, developmental stages and under variable physiological conditions, resulting in a misinterpretation of the performance of the target gene(s). This issue has been scarcely approached in woody species such as grapevine.